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sRNA Annotations

2nd structure
(RNAfold)
sRNAG0001Get Sequence
Gene Name C0067
Position 238462.....238586
Length 125 bp
Strand forward
Gene Class small RNA
Species Escherichia coli K12 MG1655
Evidence Inferred from direct assay;Traceable author statement to experimental support;
Source regulonDB

Genome position Promoter site

NO conserved alignment determine the structure

Descriptions


            "C0067 is a small RNA of approximately 124 nt in length (Hershberg R,2003). Review: (Hershberg R,2003)."
 

References

Hershberg R, Altuvia S, and Margalit H (2003) "A survey of small RNA-encoding genes in Escherichia coli." Nucleic Acids Res 31 (7)  PubMed

Comparative Genomics by UCSC Genome Browser

Network Visualization

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sRNA Expression Profiles

TitleF plasmid induced changes in expression levels in E. coli
Citation(s)16432259;16981998;SeriesGSE1154
Samples
1:MG1655_replicate12:MG1655_replicate23:MG1655F_replicate1
4:MG1655F_replicate25:DH5alpha_replicate16:DH5alpha_replicate2
7:DH5alphaF_replicate18:DH5alphaF_replicate2
IG_143_238121_240342_fwd_st
more

External Database Connections

ECK120002607
EB4503
G0-8896


Department of Biological Science and Technology,

Institute of Bioinformatics National Chiao Tung University, Hsinchu, Taiwan

Contact with: bryan@mail.NCTU.edu.tw