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sRNA Annotations

2nd structure
(RNAfold)
sRNAG0002Get Sequence
Gene Name C0293
Position 1195937.....1196009
Length 73 bp
Strand forward
Gene Class small RNA
Species Escherichia coli K12 MG1655
Evidence Traceable author statement to experimental support;Inferred from direct assay;
Source regulonDB

Genome position Promoter site

NO conserved alignment determine the structure

Descriptions


            "C0293 is a small RNA of approximately 72 nt in length (Hershberg R,2003). Review: (Hershberg R,2003)."
 

References

Hershberg R, Altuvia S, and Margalit H (2003) "A survey of small RNA-encoding genes in Escherichia coli." Nucleic Acids Res 31 (7)  PubMed

Comparative Genomics by UCSC Genome Browser

Network Visualization

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sRNA Expression Profiles

TitleF plasmid induced changes in expression levels in E. coli
Citation(s)16432259;16981998;SeriesGSE1154
Samples
1:MG1655_replicate12:MG1655_replicate23:MG1655F_replicate1
4:MG1655F_replicate25:DH5alpha_replicate16:DH5alpha_replicate2
7:DH5alphaF_replicate18:DH5alphaF_replicate2
IG_745_1195597_1197917_fwd_st
more

External Database Connections

ECK120002608
EB4508
G0-8897


Department of Biological Science and Technology,

Institute of Bioinformatics National Chiao Tung University, Hsinchu, Taiwan

Contact with: bryan@mail.NCTU.edu.tw