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sRNA Annotations

2nd structure
(RNAfold)
sRNAG0035Get Sequence
Gene Name rttR
Synonyms ECK1223;b4425;rtT;
Position 1286289.....1286459
Length 171 bp
Strand reverse
Gene Class small RNA processed from tyrT transcript
Species Escherichia coli K12 MG1655
Source regulonDB

Genome position Promoter site

NO conserved alignment determine the structure

Descriptions


            "The RtT RNA may be released from the primary tyrT transcript during tRNA processing (Bosl M,1991). rtT: repeat structure of the tyrT operon (Bosl M,1991)"
 

References

Bösl M, and Kersten H (1991) "A novel RNA product of the tyrT operon of Escherichia coli." Nucleic Acids Res 19 (21)  PubMed

Comparative Genomics by UCSC Genome Browser

Network Visualization

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External Database Connections

ECK120002661
EB4293
2847683
ABE-0047246
JWR0232
EG31131
G0-9609
b4425


Department of Biological Science and Technology,

Institute of Bioinformatics National Chiao Tung University, Hsinchu, Taiwan

Contact with: bryan@mail.NCTU.edu.tw